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The Network of Sequence Flow Between Protein Structures
The Evolutionary Design of Proteins
The Energy Landscape for Folding and Molecular Motors
Study of Emergent Transport Properties of Molecular Motor Ensemble Using Novel Computational Approach
Structural Control of Motions?
Part 3: Protein shape descriptors
Network Models for Protein Dynamics and Allostery: Application to GroEL-GroES
Multistage Optimization for Protein-protein Docking
Molecular Biology Mysteries: Knotting and linking in Proteins
Models and measures of virus growth and infection spread
Modeling Ensembles of Transmembrane Beta-barrel Proteins
Mathematical Models of Folded and Unfolded Protein Ensembles
Lecture 3: Simulating protein folding
Knot theory and proteins
Geometric simulation of protein flexibility
Geometrical Methods for the Efficient Exploration of Protein Conformation Space
Free Energies and Kinetics of Protein Folding From Coarse Master Equations
Exploring Global Energy Landscape of Lattice Protein Models via Monte Carlo Methods
Exact Methods for Simplified Protein Models
Entropic and Enthalpic Barriers in Cooperative Protein Folding
Engineering Protein Structure and Function with Theoretical Protein Design
Cluster Optimization in Protein Docking
Circadian Clocks and Switches in Cynanobacteria