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Models and measures of virus growth and infection spread
Modeling Ensembles of Transmembrane Beta-barrel Proteins
Multistage Optimization for Protein-protein Docking
Geometric simulation of protein flexibility
Engineering Protein Structure and Function with Theoretical Protein Design
The Evolutionary Design of Proteins
The Energy Landscape for Folding and Molecular Motors
Cluster Optimization in Protein Docking
Molecular Biology Mysteries: Knotting and linking in Proteins
Lecture 3: Simulating protein folding
Exploring Global Energy Landscape of Lattice Protein Models via Monte Carlo Methods
Part 3: Protein shape descriptors
Structural Control of Motions?
Free Energies and Kinetics of Protein Folding From Coarse Master Equations
Circadian Clocks and Switches in Cynanobacteria
The Network of Sequence Flow Between Protein Structures
Knot theory and proteins
Geometrical Methods for the Efficient Exploration of Protein Conformation Space
Mathematical Models of Folded and Unfolded Protein Ensembles
Entropic and Enthalpic Barriers in Cooperative Protein Folding